Yeah the number of goals shouldn't affect the result. AFAIC it is about getting a more 'realistic' result that represents the game better than say a 20-5 in a match where one team clearly edged the other but not by much e.g. Stob getting thrashed recently.
So in your case the game will go to penos.
Let's take another example.
A gets 10 votes for 1-0, 3 for 2-0 and 1 for 3-0 and above.
B gets 4 votes for 1-0, 1 for 2-0 and none for 3-0 and above.
A wins, but not by a 14-5 margin, which would have been a case usually, but the result is now a 1-0 win for A which was the most popular result.